C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: testis derived transcript
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115467 Tes-001 ENSMUSG00000029552 10090 + 6:17065149-17105823 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115467
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115467 42.039±38.56 4.174±0.24 47.999±0.92 10.749±7.17 16.360±7.35 76.800±4.48 1.168±0.49 12.615±0.60 2.188±1.86 11.324±3.23 0.585±0.22 49.290±15.14 25.136±4.56 25.564±3.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VN CIL_0007VN_0002 VISTA 6:16535376-17135875
CIL_00040R CIL_00040R_0002 CGP 6:16833381-17105828
CIL_0007SP CIL_0007SP_0002 VISTA 6:16868699-17474875
CIL_00063N CIL_00063N_0003 CGP 6:17065149-17289115

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0042127 IEA regulation of cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000073564 tes-001 protein_coding Danio_rerio 0 230
ENST00000358204 TES-001 protein_coding Homo_sapiens 0 1472
ENST00000393481 TES-002 protein_coding Homo_sapiens 0 1435
ENST00000393484 TES-005 protein_coding Homo_sapiens 0 477
ENST00000455989 TES-008 protein_coding Homo_sapiens 0 453
ENST00000463746 TES-004 retained_intron Homo_sapiens 0 455
ENST00000492891 TES-011 nonsense_mediated_decay Homo_sapiens 0 758
ENST00000496912 TES-003 retained_intron Homo_sapiens 0 758

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