C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: testis derived transcript (3 LIM domains)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492891 TES-011 ENSG00000135269 9606 + 7:116210549-116257668 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMuscleTestisENST00000492891
Transcript ID Kidney Muscle Testis
ENST00000492891 0.774±0.00 0.181±0.00 23.586±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VN CIL_0007VN_0001 VISTA 7:115642067-116242568
CIL_00040R CIL_00040R_0001 CGP 7:115935148-116258783
CIL_0007SP CIL_0007SP_0001 VISTA 7:116053609-116657055
CIL_00063N CIL_00063N_0002 CGP 7:116210493-116508541

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076654 Tes-002 protein_coding Mus_musculus 0 758
ENSMUST00000115467 Tes-001 protein_coding Mus_musculus 0 758
ENSMUST00000116614 Gm4907-001 protein_coding Mus_musculus 0 595
ENSMUST00000118300 Gm4985-001 protein_coding Mus_musculus 0 553
ENSMUST00000163718 Gm4907-201 protein_coding Mus_musculus 0 538
ENSMUST00000130207 Gm4764-001 processed_pseudogene Mus_musculus 0 507

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