C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntrophin, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115484 Sntg1-006 ENSMUSG00000025909 10090 - 1:8363183-8470520 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000115484
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000115484 0.070±0.00 0.369±0.13 0.062±0.03 0.158±0.08 0.056±0.00 0.032±0.00 0.241±0.17 0.120±0.00 0.159±0.07 0.095±0.04 3.174±1.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053R CIL_00053R_0002 CGP 1:7088920-9299878

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276467 SNTG1-201 protein_coding Homo_sapiens 0 468
ENST00000517473 SNTG1-003 protein_coding Homo_sapiens 0 468
ENST00000518864 SNTG1-002 protein_coding Homo_sapiens 0 798
ENST00000520825 SNTG1-004 nonsense_mediated_decay Homo_sapiens 0 697
ENST00000522124 SNTG1-001 protein_coding Homo_sapiens 0 800
ENST00000524004 SNTG1-009 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000620202 SNTG1-202 protein_coding Homo_sapiens 0 800

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