C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 3, group C, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115567 Nr3c1-001 ENSMUSG00000024431 10090 - 18:39410545-39490674 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115567
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115567 5.067±0.36 2.739±0.57 4.657±0.34 0.280±0.06 4.027±0.98 5.821±0.00 1.964±1.04 5.025±1.80 3.422±2.75 6.897±1.62 2.973±1.25 3.809±1.96 1.022±0.50 0.279±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004883 IDA glucocorticoid receptor activity
GO:0005496 IEA steroid binding
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0006111 IMP regulation of gluconeogenesis
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0008211 IMP glucocorticoid metabolic process
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane
GO:0030325 IMP adrenal gland development
GO:0031946 IMP regulation of glucocorticoid biosynthetic process
GO:0042711 IGI maternal behavior
GO:0042921 IMP glucocorticoid receptor signaling pathway
GO:0043402 IEA:IDA glucocorticoid mediated signaling pathway
GO:0043525 IGI positive regulation of neuron apoptotic process
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IDA protein dimerization activity
GO:0060603 IMP mammary gland duct morphogenesis
GO:1900170 IDA negative regulation of glucocorticoid mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231509 NR3C1-001 protein_coding Homo_sapiens 0 3323
ENST00000342437 NR3C2-002 nonsense_mediated_decay Homo_sapiens 0 193
ENST00000343796 NR3C1-201 protein_coding Homo_sapiens 0 4549
ENST00000344721 NR3C2-001 protein_coding Homo_sapiens 0 193
ENST00000358102 NR3C2-003 protein_coding Homo_sapiens 0 193
ENST00000394464 NR3C1-002 protein_coding Homo_sapiens 0 4549
ENST00000394466 NR3C1-006 protein_coding Homo_sapiens 0 3362
ENST00000415690 NR3C1-003 protein_coding Homo_sapiens 0 2479
ENST00000424646 NR3C1-202 protein_coding Homo_sapiens 0 3591
ENST00000502500 NR3C1-013 protein_coding Homo_sapiens 0 252
ENST00000502892 NR3C1-008 protein_coding Homo_sapiens 0 252
ENST00000503201 NR3C1-007 protein_coding Homo_sapiens 0 2793
ENST00000503313 NR3C2-007 processed_transcript Homo_sapiens 3e-22 110
ENST00000504336 NR3C1-014 processed_transcript Homo_sapiens 0 621
ENST00000504572 NR3C1-010 protein_coding Homo_sapiens 0 3369
ENST00000504753 NR3C2-006 processed_transcript Homo_sapiens 4e-38 161
ENST00000508760 NR3C1-005 protein_coding Homo_sapiens 0 252
ENST00000510170 NR3C1-004 protein_coding Homo_sapiens 0 252
ENST00000511528 NR3C2-009 protein_coding Homo_sapiens 2e-33 148
ENST00000512865 NR3C2-004 protein_coding Homo_sapiens 0 193
ENST00000514699 NR3C1-009 protein_coding Homo_sapiens 0 252
ENST00000610567 RP11-106D4.3-001 unprocessed_pseudogene Homo_sapiens 0 566

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