C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115615 Rbm3-002 ENSMUSG00000031167 10090 - X:8142361-8145723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115615
Transcript ID Adipose Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115615 15.204±4.48 24.145±3.26 33.386±1.28 12.373±0.00 6.773±1.33 43.242±9.07 13.794±1.05 9.694±1.89 22.222±3.75 29.202±14.94 2.659±0.42

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006412 IDA translation
GO:0006417 IDA regulation of translation
GO:0009409 IDA response to cold
GO:0015934 ISS large ribosomal subunit
GO:0030425 ISS dendrite
GO:0035196 IDA production of miRNAs involved in gene silencing by miRNA
GO:0043023 IPI ribosomal large subunit binding
GO:0045727 ISS positive regulation of translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354480 RBM3-004 protein_coding Homo_sapiens 0 281
ENST00000376755 RBM3-005 protein_coding Homo_sapiens 0 708
ENST00000376759 RBM3-003 protein_coding Homo_sapiens 0 726
ENST00000466764 RBM3-009 processed_transcript Homo_sapiens 0 440
ENST00000489344 RBM3-001 processed_transcript Homo_sapiens 0 442

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