C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115616 Rbm3-004 ENSMUSG00000031167 10090 - X:8142368-8145773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115616
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115616 21.523±3.93 46.776±5.94 43.261±4.93 13.949±2.51 14.616±0.00 6.470±1.79 9.152±0.96 38.812±23.08 13.350±2.00 16.782±3.35 33.096±13.26 33.618±19.62 4.203±0.96

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0006412 IDA translation
GO:0009409 IDA response to cold
GO:0035196 IDA production of miRNAs involved in gene silencing by miRNA
GO:0043023 IPI ribosomal large subunit binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354480 RBM3-004 protein_coding Homo_sapiens 0 296
ENST00000376755 RBM3-005 protein_coding Homo_sapiens 0 719
ENST00000376759 RBM3-003 protein_coding Homo_sapiens 0 737
ENST00000466764 RBM3-009 processed_transcript Homo_sapiens 0 451
ENST00000489344 RBM3-001 processed_transcript Homo_sapiens 0 451

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