C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115617 Rbm3-003 ENSMUSG00000031167 10090 - X:8142368-8145696 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115617
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115617 15.876±0.00 15.597±0.00 19.928±5.61 14.604±4.44 6.131±0.33 8.855±0.00 23.508±15.21 16.447±2.49 6.702±0.98 27.346±6.59 19.834±9.83 2.853±1.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0006412 IDA translation
GO:0009409 IDA response to cold
GO:0035196 IDA production of miRNAs involved in gene silencing by miRNA
GO:0043023 IPI ribosomal large subunit binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354480 RBM3-004 protein_coding Homo_sapiens 0 294
ENST00000376755 RBM3-005 protein_coding Homo_sapiens 0 723
ENST00000376759 RBM3-003 protein_coding Homo_sapiens 0 741
ENST00000466764 RBM3-009 processed_transcript Homo_sapiens 0 455
ENST00000489344 RBM3-001 processed_transcript Homo_sapiens 0 455

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