C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115621 Rbm3-001 ENSMUSG00000031167 10090 - X:8142359-8145880 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMusclePlacentaENSMUST00000115621
Transcript ID Bladder Liver Muscle Placenta
ENSMUST00000115621 16.156±0.00 31.486±10.20 13.592±1.66 32.242±13.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006412 IDA translation
GO:0006417 IDA regulation of translation
GO:0009409 IDA response to cold
GO:0015934 ISS large ribosomal subunit
GO:0030425 ISS dendrite
GO:0035196 IDA production of miRNAs involved in gene silencing by miRNA
GO:0043023 IPI ribosomal large subunit binding
GO:0045727 ISS positive regulation of translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354480 RBM3-004 protein_coding Homo_sapiens 0 283
ENST00000376755 RBM3-005 protein_coding Homo_sapiens 0 704
ENST00000376759 RBM3-003 protein_coding Homo_sapiens 0 723
ENST00000466764 RBM3-009 processed_transcript Homo_sapiens 0 436
ENST00000489344 RBM3-001 processed_transcript Homo_sapiens 0 438

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