C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoblastoma binding protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115861 Rbbp8-202 ENSMUSG00000041238 10090 + 18:11633276-11743207 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLungOvaryENSMUST00000115861
Transcript ID Bladder Breast Kidney Lung Ovary
ENSMUST00000115861 1.751±0.24 0.564±0.22 0.435±0.15 0.232±0.00 1.215±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NS CIL_0005NS_0002 CGP 18:11633276-11945627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IMP G1/S transition of mitotic cell cycle
GO:0000724 ISS double-strand break repair via homologous recombination
GO:0001835 IMP blastocyst hatching
GO:0007067 IEA mitotic nuclear division
GO:0031572 ISS G2 DNA damage checkpoint
GO:0051321 IEA meiotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327155 RBBP8-001 protein_coding Homo_sapiens 0 2645
ENST00000360790 RBBP8-005 protein_coding Homo_sapiens 0 2580
ENST00000399721 RBBP8-003 protein_coding Homo_sapiens 0 1563
ENST00000399722 RBBP8-004 protein_coding Homo_sapiens 0 2645
ENST00000399725 RBBP8-002 protein_coding Homo_sapiens 0 2146
ENST00000579124 RBBP8-007 protein_coding Homo_sapiens 0 268
ENST00000580892 RBBP8-013 retained_intron Homo_sapiens 0 204
ENST00000581687 RBBP8-016 protein_coding Homo_sapiens 0 507
ENST00000581819 RBBP8-010 protein_coding Homo_sapiens 0 351
ENST00000582354 RBBP8-008 protein_coding Homo_sapiens 0 771
ENST00000583057 RBBP8-015 protein_coding Homo_sapiens 0 595

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