C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 3, sigma 1 subunit, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117113 Ap3s1-ps1-001 ENSMUSG00000085611 10090 - X:38685592-38686170 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000117113
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000117113 0.227±0.06 0.018±0.00 0.031±0.01 0.668±0.00 0.423±0.00 0.084±0.00 0.116±0.01 0.146±0.17 0.242±0.06 0.114±0.06 0.057±0.00 0.691±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316788 AP3S1-001 protein_coding Homo_sapiens 0 887
ENST00000395548 AP3S1-003 retained_intron Homo_sapiens 0 787
ENST00000407157 RP3-369A17.2-001 processed_pseudogene Homo_sapiens 0 425
ENST00000432577 RP11-365D23.4-001 processed_pseudogene Homo_sapiens 0 797
ENST00000505423 AP3S1-006 processed_transcript Homo_sapiens 0 237
ENST00000506430 AP3S1-008 nonsense_mediated_decay Homo_sapiens 0 654
ENST00000507436 AP3S1-007 retained_intron Homo_sapiens 0 398
ENST00000509055 AP3S1-005 retained_intron Homo_sapiens 0 294
ENST00000514118 AP3S1-004 processed_transcript Homo_sapiens 0 294
ENST00000515066 AP3S1-002 retained_intron Homo_sapiens 0 226
ENST00000605743 RP11-253I19.4-001 processed_pseudogene Homo_sapiens 0 399

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