C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 3, sigma 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505423 AP3S1-006 ENSG00000177879 9606 + 5:115895087-115913900 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverMuscleENST00000505423
Transcript ID Brain Breast Kidney Liver Muscle
ENST00000505423 21.025±0.00 17.395±0.00 12.061±0.00 7.601±0.00 7.152±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L5 CIL_0004L5_0001 CGP 5:115804733-115841858
CIL_0004L6 CIL_0004L6_0001 CGP 5:115828200-115914081

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025357 Ap3s1-201 protein_coding Mus_musculus 0 678
ENSMUST00000117113 Ap3s1-ps1-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000178107 Ap3s1-ps2-201 processed_pseudogene Mus_musculus 0 237
ENSMUST00000164712 Gm17149-001 processed_pseudogene Mus_musculus 0 217

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