C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein S11, pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117302 Rps11-ps5-001 ENSMUSG00000082780 10090 - 7:96435546-96435999 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainENSMUST00000117302
Transcript ID Adipose Brain
ENSMUST00000117302 0.123±0.00 0.166±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000270625 RPS11-001 protein_coding Homo_sapiens 0 379
ENST00000594493 RPS11-003 protein_coding Homo_sapiens 0 379
ENST00000596873 RPS11-006 protein_coding Homo_sapiens 0 278
ENST00000599167 RPS11-004 retained_intron Homo_sapiens 0 209
ENST00000599561 RPS11-008 protein_coding Homo_sapiens 0 217
ENST00000600027 RPS11-005 retained_intron Homo_sapiens 0 209
ENST00000601216 RPS11-007 retained_intron Homo_sapiens 2.00386e-43 180
ENST00000601306 RPS11-009 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000602252 RPS11-002 retained_intron Homo_sapiens 0 281

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