C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 12598
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117333 Gm12598-001 ENSMUSG00000082875 10090 + 11:11312433-11313262 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverTestisENSMUST00000117333
Transcript ID Bladder Brain Liver Testis
ENSMUST00000117333 0.011±0.00 0.011±0.00 0.026±0.00 0.080±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LI CIL_0006LI_0002 CGP 11:11114223-11462408
CIL_0008XP CIL_0008XP_0002 VISTA 11:11227967-11828770
CIL_0006LF CIL_0006LF_0002 CGP 11:11279626-11515192

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330045 BRCC3-002 protein_coding Homo_sapiens 0 760
ENST00000340647 BRCC3-006 protein_coding Homo_sapiens 0 752
ENST00000369459 BRCC3-004 protein_coding Homo_sapiens 0 507
ENST00000369462 BRCC3-001 protein_coding Homo_sapiens 0 507
ENST00000399042 BRCC3-201 protein_coding Homo_sapiens 0 496
ENST00000411985 BRCC3-007 protein_coding Homo_sapiens 0 340
ENST00000453705 BRCC3-005 nonsense_mediated_decay Homo_sapiens 0 723
ENST00000508559 RP11-844P9.3-001 processed_pseudogene Homo_sapiens 0 468
ENST00000620502 BRCC3-202 protein_coding Homo_sapiens 0 726

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