C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508559 RP11-844P9.3-001 ENSG00000251667 9606 + 5:176308063-176309013 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000508559
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000508559 0.202±0.00 0.092±0.00 0.172±0.14 0.047±0.00 0.086±0.00 0.392±0.31 0.380±0.00 0.128±0.00 0.428±0.32 0.056±0.00 0.608±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DK CIL_0002DK_0001 CGP 5:176238367-176361968

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114074 Brcc3-004 protein_coding Mus_musculus 0 712
ENSMUST00000033544 Brcc3-001 protein_coding Mus_musculus 0 712
ENSMUST00000118428 Brcc3-008 protein_coding Mus_musculus 0 708
ENSMUST00000151938 Brcc3-003 retained_intron Mus_musculus 0 534
ENSMUST00000133781 Brcc3-007 protein_coding Mus_musculus 0 470
ENSMUST00000117333 Gm12598-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000124321 Brcc3-005 retained_intron Mus_musculus 0 337
ENSMUST00000152228 Brcc3-006 protein_coding Mus_musculus 0 224

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