C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: large subunit GTPase 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117363 Lsg1-001 ENSMUSG00000022538 10090 - 16:30560494-30587592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000117363
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000117363 0.846±0.11 1.575±0.29 1.054±0.00 0.941±0.31 1.713±0.03 0.560±0.04 0.912±0.17 1.253±0.38 1.306±0.07 0.774±0.12 1.677±0.17 0.895±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NE CIL_0000NE_0002 CGP 16:30511855-30587592
CIL_0003YH CIL_0003YH_0002 CGP 16:30560494-30602797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IBA GTPase activity
GO:0005525 ISS GTP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005829 IBA cytosol
GO:0006184 IBA GTP catabolic process
GO:0015030 ISS Cajal body
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0042254 IBA ribosome biogenesis
GO:0051168 ISS nuclear export

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265245 LSG1-001 protein_coding Homo_sapiens 0 863
ENST00000437613 LSG1-004 protein_coding Homo_sapiens 0 359
ENST00000461343 LSG1-005 retained_intron Homo_sapiens 0 351
ENST00000466391 LSG1-006 retained_intron Homo_sapiens 0 291

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