C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13607
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117875 Gm13607-001 ENSMUSG00000081257 10090 + 2:68081791-68082329 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverPlacentaENSMUST00000117875
Transcript ID Bladder Brain Breast Kidney Liver Placenta
ENSMUST00000117875 0.018±0.00 0.120±0.01 0.293±0.00 0.082±0.00 0.171±0.04 0.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HO CIL_0000HO_0002 CGP 2:67446002-68122689
CIL_00063B CIL_00063B_0002 CGP 2:67565871-68472268

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392662 ACTL6A-201 protein_coding Homo_sapiens 0 558
ENST00000429709 ACTL6A-001 protein_coding Homo_sapiens 0 558
ENST00000450518 ACTL6A-002 protein_coding Homo_sapiens 0 558
ENST00000467383 ACTL6A-013 retained_intron Homo_sapiens 0 195
ENST00000467615 ACTL6A-014 processed_transcript Homo_sapiens 0 267
ENST00000479056 ACTL6A-015 retained_intron Homo_sapiens 3e-30 135
ENST00000487978 ACTL6A-011 nonsense_mediated_decay Homo_sapiens 0 267

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