C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptotagmin VI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118117 Syt6-003 ENSMUSG00000027849 10090 + 3:103576142-103627556 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000118117
Transcript ID Ovary
ENSMUST00000118117 0.185±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006X0 CIL_0006X0_0002 CGP 3:103575231-103738001

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0007340 IEA acrosome reaction
GO:0008021 IEA synaptic vesicle
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369547 SYT6-201 protein_coding Homo_sapiens 0 1668
ENST00000607941 SYT6-001 protein_coding Homo_sapiens 0 1668
ENST00000608203 SYT6-006 protein_coding Homo_sapiens 0 953
ENST00000609117 SYT6-007 protein_coding Homo_sapiens 0 1674
ENST00000610096 SYT6-002 nonsense_mediated_decay Homo_sapiens 0 1668
ENST00000610121 SYT6-003 nonsense_mediated_decay Homo_sapiens 0 1668
ENST00000610222 SYT6-004 protein_coding Homo_sapiens 0 1668

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