C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006X0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000031463-ENSDARG00000062171 CGP 7955 11:25576570-25614851
GeneTranscriptPositionBiotype
ENSDARG00000031463 (SYT6 (1 of 2))
synaptotagmin VI 		ENSDART00000048365 (SYT6 (1 of 2)-201) 25576570-25596344 protein_coding
ENSDARG00000062171 (olfml3b)
olfactomedin-like 3b 		ENSDART00000089601 (olfml3b-001) 25605246-25614851 protein_coding
CIL_0006X0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027849-ENSMUSG00000027848 CGP 10090 3:103575231-103738001
GeneTranscriptPositionBiotype
ENSMUSG00000027848 (Olfml3)
olfactomedin-like 3 		ENSMUST00000029440 (Olfml3-001) 103733712-103738001 protein_coding
ENSMUST00000154145 (Olfml3-002) 103733700-103737968 retained_intron
ENSMUSG00000027849 (Syt6)
synaptotagmin VI 		ENSMUST00000090697 (Syt6-201) 103575281-103635179 protein_coding
ENSMUST00000117221 (Syt6-005) 103576126-103635178 protein_coding
ENSMUST00000118117 (Syt6-003) 103576142-103627556 protein_coding
ENSMUST00000118563 (Syt6-004) 103576142-103645569 protein_coding
ENSMUST00000121834 (Syt6-001) 103575231-103630946 protein_coding
ENSMUST00000132325 (Syt6-002) 103575282-103635179 nonsense_mediated_decay
ENSMUST00000136049 (Syt6-006) 103575300-103632768 nonsense_mediated_decay
ENSMUST00000151985 (Syt6-007) 103575378-103630927 nonsense_mediated_decay
ENSMUST00000183637 (Syt6-008) 103576081-103587240 protein_coding
ENSMUSG00000081910 (Gm15986)
predicted gene 15986 		ENSMUST00000122153 (Gm15986-001) 103694798-103695197 processed_pseudogene
ENSMUSG00000087119 (Atg4a-ps)
autophagy related 4A, pseudogene 		ENSMUST00000117271 (Atg4a-ps-001) 103644839-103646023 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006X0_0001ENSDARG00000031463ENSDART00000048365ENSDARG00000062171ENSDART00000089601CIL_0006X0_0002ENSMUSG00000027848ENSMUST00000029440ENSMUST00000154145ENSMUSG00000027849ENSMUST00000090697ENSMUST00000117221ENSMUST00000118117ENSMUST00000118563ENSMUST00000121834ENSMUST00000132325ENSMUST00000136049ENSMUST00000151985ENSMUST00000183637ENSMUSG00000081910ENSMUST00000122153ENSMUSG00000087119ENSMUST00000117271
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006X0_0001ENSDARG00000031463ENSDART00000048365ENSDARG00000062171ENSDART00000089601CIL_0006X0_0002ENSMUSG00000027848ENSMUST00000029440ENSMUST00000154145ENSMUSG00000027849ENSMUST00000090697ENSMUST00000117221ENSMUST00000118117ENSMUST00000118563ENSMUST00000121834ENSMUST00000132325ENSMUST00000136049ENSMUST00000151985ENSMUST00000183637ENSMUSG00000081910ENSMUST00000122153ENSMUSG00000087119ENSMUST00000117271
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031463 ENSDART00000048365 N/A N/A N/A 1.648±0.00 N/A N/A 0.034±0.00 0.093±0.00 0.029±0.00 N/A 0.345±0.00 N/A N/A N/A
ENSDARG00000062171 ENSDART00000089601 N/A N/A N/A 2.267±0.76 N/A N/A 6.989±1.59 27.079±9.96 0.444±0.00 N/A 5.615±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027848 ENSMUST00000029440 18.219±15.42 9.489±4.41 16.478±2.18 3.155±2.16 6.543±1.82 4.586±1.97 5.256±0.78 14.715±3.05 1.051±0.36 45.294±2.14 0.723±0.02 9.006±7.67 2.445±1.95 1.688±0.60
ENSMUST00000154145 4.079±0.00 N/A N/A 0.369±0.06 N/A 1.120±0.00 N/A N/A 0.193±0.05 N/A 0.151±0.00 2.578±0.00 0.363±0.00 0.481±0.11
ENSMUSG00000027849 ENSMUST00000090697 N/A N/A N/A N/A N/A 0.532±0.00 N/A N/A N/A 0.095±0.01 N/A 0.398±0.05 N/A N/A
ENSMUST00000117221 0.080±0.00 N/A 0.008±0.00 2.854±1.39 0.036±0.00 0.422±0.14 N/A N/A N/A 0.221±0.09 N/A 0.222±0.14 N/A N/A
ENSMUST00000118117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A N/A
ENSMUST00000118563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.434±0.35 N/A N/A
ENSMUST00000121834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.03 N/A N/A
ENSMUST00000132325 0.051±0.00 N/A 0.005±0.00 1.243±0.40 0.054±0.00 0.279±0.01 N/A 0.007±0.00 0.028±0.00 N/A 0.005±0.00 N/A 0.008±0.00 N/A
ENSMUST00000136049 N/A N/A N/A N/A 0.024±0.00 0.663±0.15 N/A N/A N/A 0.180±0.07 N/A 0.462±0.26 N/A 0.044±0.03
ENSMUST00000151985 0.056±0.01 N/A N/A 5.829±0.00 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A
ENSMUST00000183637 0.167±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081910 ENSMUST00000122153 N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.01 N/A N/A N/A N/A 0.133±0.00
ENSMUSG00000087119 ENSMUST00000117271 0.288±0.00 0.238±0.07 N/A N/A 0.303±0.19 N/A 0.044±0.02 0.215±0.09 0.190±0.16 0.580±0.03 0.141±0.03 0.985±0.00 0.036±0.00 0.150±0.06

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