C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11929
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118175 Gm11929-001 ENSMUSG00000083564 10090 + 4:32207148-32208092 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungENSMUST00000118175
Transcript ID Breast Colon Liver Lung
ENSMUST00000118175 0.119±0.09 0.104±0.04 0.011±0.00 0.077±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MG CIL_0008MG_0002 VISTA 4:32001903-32605410

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 712
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 573
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 697
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 712
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 712
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 593
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 523
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 379
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 470
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 285
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 529
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 409
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 573
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 573
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 521
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 540
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 440
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 630

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