C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13549
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118339 Gm13549-001 ENSMUSG00000080982 10090 - 2:59398986-59399781 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainLiverLungOvaryPlacentaENSMUST00000118339
Transcript ID Adipose Brain Liver Lung Ovary Placenta
ENSMUST00000118339 0.052±0.00 0.054±0.00 0.024±0.00 0.061±0.00 0.323±0.17 0.063±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005U5 CIL_0005U5_0002 CGP 2:59160850-59505020
CIL_00083G CIL_00083G_0002 VISTA 2:59262344-59863132
CIL_0007X8 CIL_0007X8_0002 VISTA 2:59297936-59901449
CIL_0008PS CIL_0008PS_0002 VISTA 2:59368906-59972125

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394996 LDHAP5-001 processed_pseudogene Homo_sapiens 0 544
ENST00000398295 LDHAP7-001 processed_pseudogene Homo_sapiens 0 579
ENST00000448312 LDHAP3-001 processed_pseudogene Homo_sapiens 0 604

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