C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactate dehydrogenase A pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398295 LDHAP7-001 ENSG00000235847 9606 - 2:84777259-84778223 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000398295
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000398295 3.839±0.00 0.060±0.00 1.129±0.00 2.698±0.00 2.427±0.00 1.408±0.00 7.694±0.00 7.371±0.00 0.277±0.20 0.080±0.00 0.052±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005051 Ldha-002 protein_coding Mus_musculus 0 702
ENSMUST00000048209 Ldha-001 protein_coding Mus_musculus 0 702
ENSMUST00000120376 Gm13315-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000119390 Ldha-ps-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000121000 Gm13937-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000118339 Gm13549-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000118804 Gm15707-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000120803 Gm14911-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000092621 Ldha-006 protein_coding Mus_musculus 0 501
ENSMUST00000147535 Ldha-003 protein_coding Mus_musculus 0 501
ENSMUST00000187574 RP23-251N10.2-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000119515 Gm11814-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000132157 Ldha-008 retained_intron Mus_musculus 0 363
ENSMUST00000117722 Gm14676-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000119085 Gm14470-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000117921 Gm13809-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000120684 Gm15746-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000118722 Ldha-ps2-001 processed_pseudogene Mus_musculus 6e-35 152
ENSMUST00000133062 Ldha-007 processed_transcript Mus_musculus 2e-25 121
ENSMUST00000125862 Ldha-004 processed_transcript Mus_musculus 2e-25 121
ENSMUST00000124696 Ldha-005 retained_intron Mus_musculus 2e-25 121
ENSMUST00000188353 RP24-77I21.1-001 processed_pseudogene Mus_musculus 1e-21 108

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