Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	lactate dehydrogenase A pseudogene 5
ENST00000394996	LDHAP5-001	ENSG00000213574	9606	-	10:118932674-118933295	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Kidney	Liver	Lung	Placenta
ENST00000394996	0.109±0.00	0.023±0.00	0.023±0.00	0.068±0.00	0.116±0.10	0.067±0.00	0.061±0.00	0.021±0.00	0.043±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00062M	CIL_00062M_0001	CGP	10:118674167-119033732

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000005051	Ldha-002	protein_coding	Mus_musculus	0	586
ENSMUST00000048209	Ldha-001	protein_coding	Mus_musculus	0	586
ENSMUST00000119390	Ldha-ps-001	processed_pseudogene	Mus_musculus	0	547
ENSMUST00000118339	Gm13549-001	processed_pseudogene	Mus_musculus	0	544
ENSMUST00000121188	Gm13365-001	processed_pseudogene	Mus_musculus	0	518
ENSMUST00000118804	Gm15707-001	processed_pseudogene	Mus_musculus	0	497
ENSMUST00000120376	Gm13315-001	processed_pseudogene	Mus_musculus	0	492
ENSMUST00000121000	Gm13937-001	processed_pseudogene	Mus_musculus	0	488
ENSMUST00000119515	Gm11814-001	processed_pseudogene	Mus_musculus	0	475
ENSMUST00000120803	Gm14911-001	processed_pseudogene	Mus_musculus	0	438
ENSMUST00000188353	RP24-77I21.1-001	processed_pseudogene	Mus_musculus	0	422
ENSMUST00000118722	Ldha-ps2-001	processed_pseudogene	Mus_musculus	0	416
ENSMUST00000187574	RP23-251N10.2-001	processed_pseudogene	Mus_musculus	0	388
ENSMUST00000092621	Ldha-006	protein_coding	Mus_musculus	0	300
ENSMUST00000147535	Ldha-003	protein_coding	Mus_musculus	0	300
ENSMUST00000132157	Ldha-008	retained_intron	Mus_musculus	8e-37	158

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