C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactate dehydrogenase A pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000448312 LDHAP3-001 ENSG00000236090 9606 + 2:41819747-41820754 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000448312
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000448312 3.064±0.00 1.407±0.00 0.721±0.00 2.195±0.00 1.459±0.00 3.031±0.00 4.313±0.00 8.117±0.00 2.567±0.00 1.450±0.00 0.134±0.11 0.026±0.00 0.525±0.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005051 Ldha-002 protein_coding Mus_musculus 0 863
ENSMUST00000048209 Ldha-001 protein_coding Mus_musculus 0 863
ENSMUST00000120376 Gm13315-001 processed_pseudogene Mus_musculus 0 745
ENSMUST00000092621 Ldha-006 protein_coding Mus_musculus 0 623
ENSMUST00000147535 Ldha-003 protein_coding Mus_musculus 0 623
ENSMUST00000118339 Gm13549-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000121445 Gm11980-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000132157 Ldha-008 retained_intron Mus_musculus 0 496
ENSMUST00000119085 Gm14470-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000117722 Gm14676-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000117921 Gm13809-001 processed_pseudogene Mus_musculus 0 252

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