C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5754
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118774 Gm5754-001 ENSMUSG00000081898 10090 + X:10011788-10012679 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverOvaryPlacentaTestisENSMUST00000118774
Transcript ID Bladder Brain Breast Liver Ovary Placenta Testis
ENSMUST00000118774 0.048±0.01 0.054±0.00 0.066±0.00 0.021±0.01 0.054±0.00 0.007±0.00 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Z7 CIL_0005Z7_0002 CGP X:9885622-10117709

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335007 PPP1CC-001 protein_coding Homo_sapiens 0 976
ENST00000340766 PPP1CC-002 protein_coding Homo_sapiens 0 976
ENST00000546933 PPP1CC-004 protein_coding Homo_sapiens 0 939
ENST00000550261 PPP1CC-005 nonsense_mediated_decay Homo_sapiens 0 520
ENST00000550991 PPP1CC-010 protein_coding Homo_sapiens 0 955
ENST00000551582 PPP1CC-007 protein_coding Homo_sapiens 2.8026e-45 185
ENST00000551676 PPP1CC-009 protein_coding Homo_sapiens 0 808
ENST00000553024 PPP1CC-006 retained_intron Homo_sapiens 0 664

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