| Transcript ID | Breast | Placenta | Testis |
|---|---|---|---|
| ENSMUST00000118886 | 7.881±1.12 | 1.142±0.00 | 3.237±0.97 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SNF related kinase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000118886  |
Snrk-003 |
ENSMUSG00000038145 |
10090 | + |
9:122117375-122168067  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003F0 | CIL_0003F0_0002 | CGP | 9:121981606-122169702 |
| CIL_0003F1 | CIL_0003F1_0002 | CGP | 9:122117283-122294374 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000287 | ISS | magnesium ion binding |
| GO:0004674 | ISS | protein serine/threonine kinase activity |
| GO:0005524 | ISS | ATP binding |
| GO:0005634 | ISS | nucleus |
| GO:0006468 | ISS | protein phosphorylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000296088
|
SNRK-004 | protein_coding | Homo_sapiens | 0 | 2152 |
|
ENST00000429705
|
SNRK-002 | protein_coding | Homo_sapiens | 0 | 2119 |
|
ENST00000437827
|
SNRK-003 | protein_coding | Homo_sapiens | 0 | 1282 |
|
ENST00000454177
|
SNRK-001 | protein_coding | Homo_sapiens | 0 | 2134 |
|
ENST00000462810
|
SNRK-005 | processed_transcript | Homo_sapiens | 0 | 970 |
|
ENST00000468628
|
SNRK-008 | processed_transcript | Homo_sapiens | 4e-39 | 165 |
|
ENST00000481892
|
SNRK-007 | retained_intron | Homo_sapiens | 0 | 494 |
|
ENST00000520549
|
IRGM-002 | nonsense_mediated_decay | Homo_sapiens | 1e-23 | 113 |
