C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 9392
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119337 Gm9392-001 ENSMUSG00000087298 10090 - 7:46820864-46821417 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119337
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119337 0.550±0.12 0.596±0.09 1.332±0.25 1.339±0.75 1.624±0.29 0.948±0.27 0.449±0.22 1.063±0.37 1.026±0.47 1.384±0.32 0.621±0.09 1.042±0.28 1.112±0.46 0.702±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041D CIL_00041D_0003 CGP 7:46760466-46823800
CIL_000445 CIL_000445_0002 CGP 7:46796103-46855627

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356415 RAP1A-002 protein_coding Homo_sapiens 0 830
ENST00000369709 RAP1A-001 protein_coding Homo_sapiens 0 830
ENST00000433097 RAP1A-003 protein_coding Homo_sapiens 0 553
ENST00000494982 RAP1A-004 processed_transcript Homo_sapiens 0 688
ENST00000554629 RAP1AP-001 processed_pseudogene Homo_sapiens 0 520
ENST00000579654 CTD-2350C19.5-001 unprocessed_pseudogene Homo_sapiens 0 387

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