C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAP1A, member of RAS oncogene family pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554629 RAP1AP-001 ENSG00000258769 9606 + 14:74482985-74483435 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyOvaryTestisENST00000554629
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Ovary Testis
ENST00000554629 0.025±0.00 0.204±0.00 0.417±0.39 0.023±0.00 0.070±0.00 0.050±0.00 0.107±0.09 0.230±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BB CIL_0005BB_0001 CGP 14:74405893-74494177
CIL_0002T3 CIL_0002T3_0002 CGP 14:74476192-74497106

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090678 Rap1a-201 protein_coding Mus_musculus 0 536
ENSMUST00000119337 Gm9392-001 processed_pseudogene Mus_musculus 0 520

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