C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13170
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119716 Gm13170-001 ENSMUSG00000081522 10090 + 4:146178124-146178766 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverMuscleOvaryPlacentaTestisENSMUST00000119716
Transcript ID Bladder Brain Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000119716 0.021±0.01 0.043±0.00 0.165±0.00 0.031±0.03 0.047±0.01 0.065±0.00 0.028±0.00 0.056±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L8 CIL_0006L8_000C CGP 4:146097298-146198755

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366304 HMGB1P39-001 processed_pseudogene Homo_sapiens 9e-23 111
ENST00000395823 HMGB1P10-001 processed_pseudogene Homo_sapiens 0 534
ENST00000406019 HMGB1P13-001 processed_pseudogene Homo_sapiens 0 431
ENST00000569046 RP11-673C5.1-001 processed_pseudogene Homo_sapiens 0 638

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