C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12341
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119724 Gm12341-001 ENSMUSG00000080763 10090 + 11:76514069-76514571 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLungOvaryPlacentaTestisENSMUST00000119724
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENSMUST00000119724 0.083±0.00 0.147±0.00 0.055±0.01 0.056±0.05 0.476±0.00 0.294±0.11 0.080±0.00 0.094±0.00 0.432±0.12 0.156±0.00 0.086±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012J CIL_00012J_0002 CGP 11:76406952-76622314
CIL_0001Q6 CIL_0001Q6_0002 CGP 11:76416734-76673676

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000084795 RPL18-006 protein_coding Homo_sapiens 0 457
ENST00000486306 RP11-313M3.1-001 processed_pseudogene Homo_sapiens 4.06377e-44 182
ENST00000546623 RPL18-015 protein_coding Homo_sapiens 0 335
ENST00000547892 RPL18-003 retained_intron Homo_sapiens 2e-24 119
ENST00000547897 RPL18-010 non_stop_decay Homo_sapiens 3e-25 119
ENST00000549273 RPL18-014 protein_coding Homo_sapiens 6e-25 119
ENST00000549370 RPL18-009 nonsense_mediated_decay Homo_sapiens 0 422
ENST00000549533 RPL18-016 retained_intron Homo_sapiens 5.04467e-44 182
ENST00000549920 RPL18-001 protein_coding Homo_sapiens 0 457
ENST00000550645 RPL18-012 protein_coding Homo_sapiens 1e-39 167
ENST00000551749 RPL18-004 retained_intron Homo_sapiens 1e-24 119
ENST00000552347 RPL18-005 retained_intron Homo_sapiens 0 274
ENST00000552588 RPL18-008 protein_coding Homo_sapiens 0 407

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