C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11483
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119839 Gm11483-001 ENSMUSG00000083943 10090 - 4:63567414-63567660 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverLungPlacentaTestisENSMUST00000119839
Transcript ID Adrenal Brain Liver Lung Placenta Testis
ENSMUST00000119839 1.175±0.00 0.569±0.24 0.644±0.63 0.882±0.16 0.068±0.00 0.528±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004P8 CIL_0004P8_0002 CGP 4:63544772-63586357

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329092 RPL35A-005 processed_transcript Homo_sapiens 0 195
ENST00000429437 RPL35A-007 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000439255 RPL35A-008 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000442341 RPL35A-006 protein_coding Homo_sapiens 0 231
ENST00000448864 RPL35A-002 protein_coding Homo_sapiens 0 283
ENST00000464167 RPL35A-001 protein_coding Homo_sapiens 0 283
ENST00000468671 RP11-14K2.1-001 processed_pseudogene Homo_sapiens 0 250
ENST00000474640 RPL35A-009 retained_intron Homo_sapiens 0 211
ENST00000485439 RPL35A-004 retained_intron Homo_sapiens 0 267
ENST00000497334 CTD-2339M3.1-001 processed_pseudogene Homo_sapiens 2e-29 132

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