C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sacsin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119943 Sacs-005 ENSMUSG00000048279 10090 + 14:61148052-61215497 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000119943
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000119943 0.644±0.19 0.166±0.04 3.148±0.00 2.913±0.30 0.301±0.07 1.668±0.08 0.143±0.06 0.632±0.86 1.164±0.19 0.647±0.41 0.514±0.25 0.691±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZO CIL_0007ZO_0002 VISTA 14:60704739-61305741
CIL_0008P8 CIL_0008P8_0002 VISTA 14:60705067-61305254
CIL_0005YX CIL_0005YX_0002 CGP 14:61138457-61258490

Gene Ontology

GO IDEvidence TypeGO Description
GO:0050750 ISA low-density lipoprotein particle receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382292 SACS-001 protein_coding Homo_sapiens 0 16710
ENST00000382298 SACS-201 protein_coding Homo_sapiens 0 16710
ENST00000402364 SACS-003 protein_coding Homo_sapiens 0 16450
ENST00000423156 SACS-005 protein_coding Homo_sapiens 0 1046
ENST00000455470 SACS-004 protein_coding Homo_sapiens 0 2377
ENST00000476776 SACS-002 processed_transcript Homo_sapiens 0 484
ENST00000535634 AP000647.3-001 processed_pseudogene Homo_sapiens 0 375

Loading