C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13204
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120110 Gm13204-001 ENSMUSG00000082860 10090 - 4:148569056-148569876 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120110
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120110 2.700±1.65 1.833±0.54 1.335±0.07 3.259±0.22 2.008±0.27 1.392±0.68 0.315±0.12 0.800±0.21 0.854±0.49 2.474±0.08 1.063±0.25 3.205±0.51 1.411±0.46 3.747±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JY CIL_0008JY_0002 VISTA 4:148408124-149009196
CIL_0008JG CIL_0008JG_0002 VISTA 4:148444314-149044861
CIL_0008RU CIL_0008RU_0002 VISTA 4:148508781-149109416
CIL_0008S2 CIL_0008S2_0002 VISTA 4:148555953-149160332

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 381
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 381
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 448
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 350
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 412
ENST00000492327 RPS2P39-001 processed_pseudogene Homo_sapiens 0 200
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 473

Loading