C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: S-adenosylmethionine decarboxylase, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120127 Amd-ps1-001 ENSMUSG00000083823 10090 + X:155155195-155156188 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMusclePlacentaENSMUST00000120127
Transcript ID Bladder Liver Muscle Placenta
ENSMUST00000120127 0.016±0.00 0.006±0.00 0.040±0.00 0.027±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000064391 amd1-201 protein_coding Danio_rerio 0 562
ENSDART00000135919 amd1-001 protein_coding Danio_rerio 0 562
ENST00000368876 AMD1-002 protein_coding Homo_sapiens 0 1351
ENST00000368877 AMD1-005 protein_coding Homo_sapiens 0 1256
ENST00000368882 AMD1-201 protein_coding Homo_sapiens 0 808
ENST00000368885 AMD1-003 protein_coding Homo_sapiens 0 1456
ENST00000406493 RP3-382I10.3-001 processed_pseudogene Homo_sapiens 0 713
ENST00000412936 AMDP1-001 processed_pseudogene Homo_sapiens 0 1072
ENST00000451850 AMD1-001 nonsense_mediated_decay Homo_sapiens 0 880
ENST00000457220 AMD1P1-001 processed_pseudogene Homo_sapiens 0 833
ENST00000465404 AMD1-004 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000508874 CTD-2210P15.2-001 processed_pseudogene Homo_sapiens 0 1181
ENST00000605729 CTD-2356P16.6-001 processed_pseudogene Homo_sapiens 0 189
ENST00000610605 AMD1-202 protein_coding Homo_sapiens 0 1351
ENST00000612642 AMD1-006 retained_intron Homo_sapiens 0 1042
ENST00000619590 AMD1-007 retained_intron Homo_sapiens 0 566

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