C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440229 AC092641.2-001 ENSG00000227176 9606 - 2:170077224-170078294 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000440229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000440229 0.126±0.00 0.260±0.00 0.252±0.00 0.129±0.10 0.126±0.00 0.320±0.31 0.560±0.00 0.068±0.01 0.183±0.00 0.073±0.04 0.093±0.00 0.127±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VY CIL_0007VY_0001 VISTA 2:169713097-170314655
CIL_0004SI CIL_0004SI_0001 CGP 2:169810081-170084131
CIL_0004SH CIL_0004SH_0001 CGP 2:169827458-170655171

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121139 Gm15596-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000073456 Nsa2-201 protein_coding Mus_musculus 0 621
ENSMUST00000120534 Gm12599-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000121488 Gm6451-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000119424 Gm13333-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000162341 Gm6808-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000188406 RP24-178K6.2-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000119862 Gm13207-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000120926 Gm9060-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000121467 Gm6027-001 processed_pseudogene Mus_musculus 0 433

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