C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13080
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120556 Gm13080-001 ENSMUSG00000044377 10090 - 4:143611658-143612077 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120556
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120556 0.308±0.00 0.088±0.03 0.083±0.01 0.520±0.18 0.133±0.00 0.313±0.13 0.139±0.16 0.591±0.00 0.320±0.21 0.498±0.28 0.078±0.02 0.258±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359680 TRAPPC2-201 protein_coding Homo_sapiens 0 475
ENST00000380578 TRAPPC2-001 retained_intron Homo_sapiens 0 335
ENST00000380579 TRAPPC2-002 protein_coding Homo_sapiens 0 475
ENST00000415662 TRAPPC2P10-001 unprocessed_pseudogene Homo_sapiens 5e-36 154
ENST00000426293 TRAPPC2P5-001 unprocessed_pseudogene Homo_sapiens 4e-37 158
ENST00000458511 TRAPPC2-005 protein_coding Homo_sapiens 0 475
ENST00000517589 TRAPPC2P2-001 processed_pseudogene Homo_sapiens 0 233
ENST00000518847 TRAPPC2-008 protein_coding Homo_sapiens 0 276
ENST00000519382 TRAPPC2-004 retained_intron Homo_sapiens 0 276
ENST00000519885 TRAPPC2-006 protein_coding Homo_sapiens 0 335
ENST00000543226 TRAPPC2P1-002 protein_coding Homo_sapiens 0 459
ENST00000596755 TRAPPC2P1-003 protein_coding Homo_sapiens 0 459

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