C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15719
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120619 Gm15719-001 ENSMUSG00000081242 10090 + 5:21689541-21690175 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverOvaryPlacentaTestisENSMUST00000120619
Transcript ID Adipose Bladder Brain Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000120619 0.089±0.01 0.029±0.00 0.101±0.04 0.070±0.00 0.330±0.11 0.061±0.03 0.411±0.33 0.040±0.02 0.127±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_0005CI CIL_0005CI_0002 CGP 5:21645813-21701396
CIL_0005CJ CIL_0005CJ_0002 CGP 5:21662901-21757152

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353331 BCLAF1-201 protein_coding Homo_sapiens 0 723
ENST00000392348 BCLAF1-011 protein_coding Homo_sapiens 0 723
ENST00000505813 CTD-2089O24.1-001 processed_pseudogene Homo_sapiens 0 652
ENST00000527536 BCLAF1-005 protein_coding Homo_sapiens 0 761
ENST00000527613 BCLAF1-008 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000527759 BCLAF1-006 protein_coding Homo_sapiens 0 723
ENST00000529826 BCLAF1-001 protein_coding Homo_sapiens 0 761
ENST00000530429 BCLAF1-009 nonsense_mediated_decay Homo_sapiens 0 723
ENST00000530767 BCLAF1-010 protein_coding Homo_sapiens 0 761
ENST00000531224 BCLAF1-003 protein_coding Homo_sapiens 0 761
ENST00000532384 BCLAF1-002 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000534269 BCLAF1-007 nonsense_mediated_decay Homo_sapiens 0 723
ENST00000624956 ABBA01017803.1-201 pseudogene Homo_sapiens 0 706

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