C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transferrin receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120680 Tfrc-002 ENSMUSG00000022797 10090 + 16:32608983-32623741 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000120680
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000120680 8.685±0.00 4.905±3.26 110.278±5.65 2.103±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QR CIL_0008QR_0002 VISTA 16:32268412-32870796
CIL_0007CJ CIL_0007CJ_0003 CGP 16:32608920-32683493

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003725 ISO double-stranded RNA binding
GO:0004998 TAS transferrin receptor activity
GO:0005381 TAS iron ion transmembrane transporter activity
GO:0005515 IPI protein binding
GO:0005768 IDA endosome
GO:0005886 IDA plasma membrane
GO:0005905 IDA coated pit
GO:0006879 IMP cellular iron ion homeostasis
GO:0006898 IEA receptor-mediated endocytosis
GO:0009897 IDA external side of plasma membrane
GO:0009986 ISO cell surface
GO:0016023 ISO cytoplasmic membrane-bounded vesicle
GO:0033572 IEA transferrin transport
GO:0034755 TAS iron ion transmembrane transport
GO:0048471 IDA perinuclear region of cytoplasm
GO:0055037 ISO recycling endosome
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360110 TFRC-001 protein_coding Homo_sapiens 0 1171
ENST00000392396 TFRC-002 protein_coding Homo_sapiens 0 1171
ENST00000420415 TFRC-003 protein_coding Homo_sapiens 0 900
ENST00000421258 TFRC-005 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000464011 TFRC-006 processed_transcript Homo_sapiens 0 281

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