C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007CJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012552-ENSDARG00000062261 CGP 7955 24:26431769-26464992
GeneTranscriptPositionBiotype
ENSDARG00000012552 (tfr1b)
transferrin receptor 1b 		ENSDART00000021095 (tfr1b-201) 26431769-26445940 protein_coding
ENSDARG00000062261 (CT476804.2)
Uncharacterized protein 		ENSDART00000089788 (CT476804.2-201) 26454242-26464992 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0007CJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077372-ENSDARG00000090646 CGP 7955 24:26813696-26854215
GeneTranscriptPositionBiotype
ENSDARG00000090646 (tnk2a)
tyrosine kinase, non-receptor, 2a 		ENSDART00000089780 (tnk2a-201) 26842612-26844760 protein_coding
ENSDART00000124446 (tnk2a-202) 26836239-26838039 protein_coding
ENSDART00000131017 (tnk2a-203) 26845364-26854215 protein_coding
ENSDART00000143485 (tnk2a-001) 26832997-26846794 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0007CJ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022797-ENSMUSG00000022791 CGP 10090 16:32608920-32683493
GeneTranscriptPositionBiotype
ENSMUSG00000022791 (Tnk2)
tyrosine kinase, non-receptor, 2 		ENSMUST00000115120 (Tnk2-004) 32673156-32683493 protein_coding
ENSMUST00000115121 (Tnk2-016) 32673192-32680133 protein_coding
ENSMUST00000115122 (Tnk2-015) 32673154-32679466 protein_coding
ENSMUST00000115123 (Tnk2-003) 32644826-32683492 protein_coding
ENSMUST00000115124 (Tnk2-001) 32644673-32683493 protein_coding
ENSMUST00000115125 (Tnk2-005) 32644643-32683493 protein_coding
ENSMUST00000115126 (Tnk2-002) 32644643-32683493 protein_coding
ENSMUST00000124585 (Tnk2-009) 32644291-32663888 processed_transcript
ENSMUST00000131238 (Tnk2-007) 32673178-32679680 protein_coding
ENSMUST00000137044 (Tnk2-013) 32668240-32671634 processed_transcript
ENSMUST00000145627 (Tnk2-010) 32643874-32668279 processed_transcript
ENSMUST00000150383 (Tnk2-011) 32657023-32668271 processed_transcript
ENSMUST00000152361 (Tnk2-008) 32673199-32679882 protein_coding
ENSMUST00000156614 (Tnk2-012) 32658925-32668263 processed_transcript
ENSMUST00000164358 (Tnk2-014) 32644959-32668292 processed_transcript
ENSMUST00000168506 (Tnk2-017) 32673195-32679064 retained_intron
ENSMUSG00000022797 (Tfrc)
transferrin receptor 		ENSMUST00000023486 (Tfrc-001) 32608920-32632794 protein_coding
ENSMUST00000120680 (Tfrc-002) 32608983-32623741 protein_coding
ENSMUST00000124243 (Tfrc-003) 32609250-32613226 protein_coding
ENSMUST00000128285 (Tfrc-004) 32624442-32632790 retained_intron
ENSMUST00000137901 (Tfrc-005) 32615232-32617156 retained_intron
ENSMUST00000155929 (Tfrc-006) 32618279-32620881 retained_intron

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CJ_0001ENSDARG00000012552ENSDART00000021095ENSDARG00000062261ENSDART00000089788CIL_0007CJ_0002ENSDARG00000090646ENSDART00000089780ENSDART00000124446ENSDART00000131017ENSDART00000143485CIL_0007CJ_0003ENSMUSG00000022791ENSMUST00000115120ENSMUST00000115121ENSMUST00000115122ENSMUST00000115123ENSMUST00000115124ENSMUST00000115125ENSMUST00000115126ENSMUST00000124585ENSMUST00000131238ENSMUST00000137044ENSMUST00000145627ENSMUST00000150383ENSMUST00000152361ENSMUST00000156614ENSMUST00000164358ENSMUST00000168506ENSMUSG00000022797ENSMUST00000023486ENSMUST00000120680ENSMUST00000124243ENSMUST00000128285ENSMUST00000137901ENSMUST00000155929
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CJ_0001ENSDARG00000012552ENSDART00000021095ENSDARG00000062261ENSDART00000089788CIL_0007CJ_0002ENSDARG00000090646ENSDART00000089780ENSDART00000131017CIL_0007CJ_0003ENSMUSG00000022791ENSMUST00000115120ENSMUST00000115121ENSMUST00000115123ENSMUST00000115124ENSMUST00000115125ENSMUST00000115126ENSMUST00000137044ENSMUSG00000022797ENSMUST00000023486ENSMUST00000120680ENSMUST00000128285
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012552 ENSDART00000021095 N/A N/A N/A 2.528±1.39 N/A N/A 2.794±1.33 6.435±2.03 0.469±0.00 N/A 0.383±0.00 N/A N/A N/A
ENSDARG00000062261 ENSDART00000089788 N/A N/A N/A 0.785±0.72 N/A N/A 0.034±0.00 0.019±0.00 N/A N/A 0.019±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000090646 ENSDART00000089780 N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A
ENSDART00000124446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000131017 N/A N/A N/A 8.985±0.73 N/A N/A 0.421±0.47 0.145±0.07 0.023±0.00 N/A 0.571±0.00 N/A N/A N/A
ENSDART00000143485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022791 ENSMUST00000115120 6.006±0.00 5.289±1.26 21.097±1.28 16.836±6.59 15.197±2.48 34.332±7.93 N/A 2.344±0.48 3.239±1.39 5.727±0.52 5.413±2.50 8.983±2.39 12.074±9.50 N/A
ENSMUST00000115121 N/A N/A N/A N/A 18.906±0.00 N/A N/A N/A 2.834±0.00 N/A N/A 13.189±1.33 N/A N/A
ENSMUST00000115122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115123 13.298±0.25 7.974±1.03 4.000±0.00 8.185±1.17 11.693±5.12 8.392±1.47 3.412±0.93 4.803±0.69 2.712±1.67 12.033±2.05 5.017±2.40 11.194±3.65 1.557±0.00 2.691±0.66
ENSMUST00000115124 N/A N/A 10.143±1.74 19.610±15.75 N/A N/A 1.420±0.17 1.232±0.00 2.028±0.98 N/A 6.207±1.19 9.467±0.00 3.215±2.53 1.373±0.22
ENSMUST00000115125 4.219±0.58 3.912±0.00 5.014±0.08 14.373±9.12 4.120±1.46 N/A 2.083±0.64 2.282±0.59 1.750±1.00 5.734±0.57 N/A 5.276±0.96 10.196±5.51 2.482±0.14
ENSMUST00000115126 N/A N/A N/A 15.582±6.10 N/A N/A 0.926±0.25 N/A N/A N/A 3.856±1.36 N/A N/A N/A
ENSMUST00000124585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137044 N/A N/A N/A N/A 4.736±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022797 ENSMUST00000023486 2.801±0.89 2.382±0.53 3.036±0.37 4.207±1.78 2.910±0.48 6.724±1.88 14.307±3.89 5.264±0.90 46.123±53.36 7.754±0.56 25.111±2.65 3.365±1.68 76.306±54.82 3.030±0.93
ENSMUST00000120680 N/A N/A N/A 8.685±0.00 N/A N/A N/A N/A N/A N/A N/A 4.905±3.26 110.278±5.65 2.103±0.00
ENSMUST00000124243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128285 2.451±0.31 1.088±0.23 3.444±0.85 6.266±1.41 3.071±0.63 5.857±1.99 6.715±1.66 2.721±0.47 30.781±38.02 5.174±0.93 6.134±2.41 2.229±1.17 20.246±3.16 N/A
ENSMUST00000137901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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