C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transferrin receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420415 TFRC-003 ENSG00000072274 9606 - 3:196049284-196082094 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyTestisENST00000420415
Transcript ID Brain Breast Heart Kidney Testis
ENST00000420415 2.608±0.00 2.157±0.00 4.668±0.00 5.593±0.00 4.597±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QR CIL_0008QR_0001 VISTA 3:195819501-196421470
CIL_0003O7 CIL_0003O7_0002 CGP 3:195863364-196082189

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004998 IEA transferrin receptor activity
GO:0006898 IEA receptor-mediated endocytosis
GO:0033572 IEA transferrin transport
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023486 Tfrc-001 protein_coding Mus_musculus 0 1764
ENSMUST00000120680 Tfrc-002 protein_coding Mus_musculus 0 900
ENSMUST00000128285 Tfrc-004 retained_intron Mus_musculus 0 817
ENSMUST00000137901 Tfrc-005 retained_intron Mus_musculus 6e-36 158
ENSDART00000021095 tfr1b-201 protein_coding Danio_rerio 2e-21 110
ENSDART00000137851 tfr1b-001 protein_coding Danio_rerio 2e-21 110

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