C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF type zinc finger domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120784 Trafd1-002 ENSMUSG00000042726 10090 - 5:121371730-121385571 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120784
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120784 9.032±2.64 6.783±0.04 7.673±3.67 9.043±3.01 7.616±0.96 5.609±0.85 5.969±1.82 5.637±1.41 12.105±1.25 3.849±0.38 9.571±3.46 5.902±1.48 35.871±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008270 IEA zinc ion binding
GO:0045824 IMP negative regulation of innate immune response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257604 TRAFD1-201 protein_coding Homo_sapiens 0 1358
ENST00000412615 TRAFD1-001 protein_coding Homo_sapiens 0 1358
ENST00000552890 TRAFD1-003 nonsense_mediated_decay Homo_sapiens 0 483

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