C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12516
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120819 Gm12516-001 ENSMUSG00000084144 10090 - 4:55392317-55392701 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120819
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120819 0.191±0.07 0.607±0.00 0.257±0.11 0.534±0.05 0.187±0.03 0.557±0.00 0.140±0.01 0.322±0.27 0.161±0.00 0.194±0.00 0.736±0.08 0.321±0.06 0.953±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000225 CIL_000225_0003 CGP 4:55350043-55532466

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253788 RPL27-001 protein_coding Homo_sapiens 0 374
ENST00000425821 RP4-604A21.1-001 processed_pseudogene Homo_sapiens 0 220
ENST00000427253 AC009362.2-001 processed_pseudogene Homo_sapiens 0 318
ENST00000434035 AC007679.4-001 processed_pseudogene Homo_sapiens 0 233
ENST00000477507 CTD-2186M15.1-001 processed_pseudogene Homo_sapiens 0 281
ENST00000586277 RPL27-006 protein_coding Homo_sapiens 0 294
ENST00000589037 RPL27-004 protein_coding Homo_sapiens 0 374
ENST00000589913 RPL27-003 protein_coding Homo_sapiens 0 374
ENST00000590864 RPL27-008 protein_coding Homo_sapiens 0 292
ENST00000593262 RPL27-002 retained_intron Homo_sapiens 0 292

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