C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425821 RP4-604A21.1-001 ENSG00000225616 9606 - 1:28982278-28982608 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLungTestisENST00000425821
Transcript ID Heart Lung Testis
ENST00000425821 0.091±0.04 1.641±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0001 VISTA 1:28583201-29186892

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118048 Gm11518-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000107249 Rpl27-002 protein_coding Mus_musculus 0 303
ENSMUST00000139939 Rpl27-003 processed_transcript Mus_musculus 0 303
ENSMUST00000077856 Rpl27-001 protein_coding Mus_musculus 0 303
ENSMUST00000097682 Rpl27-ps3-201 protein_coding Mus_musculus 0 303
ENSMUST00000119683 Gm6341-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000088784 Rpl27-ps1-201 processed_pseudogene Mus_musculus 0 287
ENSMUST00000121828 Gm15730-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000079690 Gm4825-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000120819 Gm12516-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000119016 Gm11699-001 processed_pseudogene Mus_musculus 7e-40 167

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