C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13461
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120980 Gm13461-001 ENSMUSG00000081999 10090 - 2:41987473-41988829 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120980
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120980 0.454±0.07 0.692±0.49 1.681±1.11 0.174±0.07 0.151±0.01 0.355±0.23 0.121±0.04 4.524±5.19 0.173±0.00 0.234±0.05 0.709±0.00 0.463±0.52 1.276±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NW CIL_0003NW_0002 CGP 2:40595248-43682715

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392367 RAN-005 protein_coding Homo_sapiens 0 612
ENST00000392369 RAN-003 protein_coding Homo_sapiens 0 758
ENST00000411454 RANP1-001 processed_pseudogene Homo_sapiens 0 676
ENST00000413361 RANP4-001 processed_pseudogene Homo_sapiens 0 499
ENST00000413691 RANP6-001 processed_pseudogene Homo_sapiens 0 592
ENST00000414129 RANP1-001 processed_pseudogene Homo_sapiens 0 680
ENST00000420270 RANP1-001 processed_pseudogene Homo_sapiens 0 680
ENST00000427731 RANP5-001 processed_pseudogene Homo_sapiens 0 479
ENST00000444720 RANP8-001 processed_pseudogene Homo_sapiens 0 438
ENST00000445266 RANP1-001 processed_pseudogene Homo_sapiens 0 676
ENST00000445316 RANP1-001 processed_pseudogene Homo_sapiens 0 680
ENST00000448750 RAN-004 protein_coding Homo_sapiens 0 737
ENST00000455094 RANP1-001 processed_pseudogene Homo_sapiens 0 680
ENST00000456833 RANP2-001 processed_pseudogene Homo_sapiens 0 278
ENST00000464211 RAN-011 retained_intron Homo_sapiens 0 606
ENST00000477395 RAN-002 retained_intron Homo_sapiens 0 510
ENST00000530970 RANP3-001 processed_pseudogene Homo_sapiens 0 274
ENST00000535090 RAN-010 protein_coding Homo_sapiens 0 669
ENST00000536606 RAN-009 nonsense_mediated_decay Homo_sapiens 0 536
ENST00000541630 RAN-008 protein_coding Homo_sapiens 0 719
ENST00000541679 RAN-012 protein_coding Homo_sapiens 0 244
ENST00000543796 RAN-001 protein_coding Homo_sapiens 0 758

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