C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sacsin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121091 Sacs-003 ENSMUSG00000048279 10090 + 14:61172990-61195663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverOvaryENSMUST00000121091
Transcript ID Adrenal Colon Kidney Liver Ovary
ENSMUST00000121091 0.267±0.09 0.182±0.00 0.045±0.00 0.067±0.05 0.527±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZO CIL_0007ZO_0002 VISTA 14:60704739-61305741
CIL_0008P8 CIL_0008P8_0002 VISTA 14:60705067-61305254
CIL_0005YX CIL_0005YX_0002 CGP 14:61138457-61258490

Gene Ontology

GO IDEvidence TypeGO Description
GO:0050750 ISA low-density lipoprotein particle receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382292 SACS-001 protein_coding Homo_sapiens 0 2401
ENST00000382298 SACS-201 protein_coding Homo_sapiens 0 2401
ENST00000402364 SACS-003 protein_coding Homo_sapiens 0 2152
ENST00000423156 SACS-005 protein_coding Homo_sapiens 0 1046
ENST00000455470 SACS-004 protein_coding Homo_sapiens 0 2078
ENST00000476776 SACS-002 processed_transcript Homo_sapiens 0 497
ENST00000535634 AP000647.3-001 processed_pseudogene Homo_sapiens 0 375

Loading