C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhophilin, Rho GTPase binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121137 Rhpn1-001 ENSMUSG00000022580 10090 + 15:75704280-75714408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121137 0.383±0.27 0.236±0.08 0.166±0.05 5.641±1.37 0.297±0.08 0.145±0.02 0.059±0.00 11.018±1.85 0.089±0.08 1.000±0.22 0.056±0.00 2.320±0.90 1.168±0.40 11.113±1.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0001NH CIL_0001NH_0002 CGP 15:75657035-75714410
CIL_0001NI CIL_0001NI_0002 CGP 15:75704280-75747922

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005083 IPI small GTPase regulator activity
GO:0007165 IEA signal transduction
GO:0050790 IPI regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289013 RHPN1-001 protein_coding Homo_sapiens 0 1352
ENST00000522335 RHPN1-002 retained_intron Homo_sapiens 0 846
ENST00000620174 RHPN1-201 protein_coding Homo_sapiens 0 846

Loading