C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00063R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004823-ENSDARG00000041107 CGP 7955 18:20423089-20503521
GeneTranscriptPositionBiotype
ENSDARG00000004823 (asz1)
ankyrin repeat, SAM and basic leucine zipper domain containing 1 		ENSDART00000005145 (asz1-001) 20423089-20454832 protein_coding
ENSDARG00000041107 (cftr)
cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7) 		ENSDART00000060243 (cftr-001) 20457801-20503521 protein_coding
ENSDARG00000085222 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120622 (5S_rRNA.1074-201) 20473522-20473638 rRNA

Danio rerio Ensembl (Zv9)

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CIL_00063R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154438-ENSG00000001626 CGP 9606 7:117363222-117715971
GeneTranscriptPositionBiotype
ENSG00000001626 (CFTR)
cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) 		ENST00000003084 (CFTR-001) 117479963-117668665 protein_coding
ENST00000426809 (CFTR-005) 117480095-117667071 protein_coding
ENST00000429014 (CFTR-007) 117689713-117715971 processed_transcript
ENST00000446805 (CFTR-004) 117479304-117530978 protein_coding
ENST00000468795 (CFTR-002) 117611617-117627910 protein_coding
ENST00000472848 (CFTR-006) 117559638-117587749 processed_transcript
ENST00000546407 (CFTR-003) 117465784-117504308 processed_transcript
ENST00000600166 (CFTR-008) 117652843-117715948 protein_coding
ENST00000608965 (CFTR-009) 117710017-117715873 processed_transcript
ENST00000610149 (CFTR-010) 117710132-117715827 processed_transcript
ENST00000621535 (CFTR-011) 117713753-117715901 retained_intron
ENSG00000077063 (CTTNBP2)
cortactin binding protein 2 		ENST00000160373 (CTTNBP2-001) 117710651-117873507 protein_coding
ENST00000412853 (CTTNBP2-007) 117810767-117874139 protein_coding
ENST00000416239 (CTTNBP2-004) 117755380-117760593 protein_coding
ENST00000434890 (CTTNBP2-002) 117792586-117871638 protein_coding
ENST00000435233 (CTTNBP2-009) 117735331-117760647 protein_coding
ENST00000441556 (CTTNBP2-012) 117710863-117873429 nonsense_mediated_decay
ENST00000445366 (CTTNBP2-010) 117711628-117728208 nonsense_mediated_decay
ENST00000446636 (CTTNBP2-011) 117710741-117791780 protein_coding
ENST00000454375 (CTTNBP2-006) 117792662-117872220 protein_coding
ENST00000467088 (CTTNBP2-008) 117760268-117767191 retained_intron
ENST00000482124 (CTTNBP2-005) 117755372-117758112 retained_intron
ENST00000487820 (CTTNBP2-003) 117792596-117793605 processed_transcript
ENSG00000083622 (AC000111.6)
 ENST00000456270 (AC000111.6-001) 117604791-117647415 antisense
ENSG00000154438 (ASZ1)
ankyrin repeat, SAM and basic leucine zipper domain containing 1 		ENST00000284629 (ASZ1-001) 117363222-117427523 protein_coding
ENST00000428663 (ASZ1-005) 117422272-117428123 protein_coding
ENST00000450714 (ASZ1-004) 117363536-117427507 nonsense_mediated_decay
ENST00000463182 (ASZ1-003) 117363308-117427498 retained_intron
ENST00000465832 (ASZ1-002) 117363315-117427505 retained_intron
ENST00000479454 (ASZ1-006) 117363308-117427503 retained_intron
ENSG00000234001 (AC000111.5)
 ENST00000448200 (AC000111.5-001) 117586207-117586416 processed_pseudogene
ENSG00000237974 (AC000111.4)
 ENST00000433478 (AC000111.4-001) 117487737-117487929 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00063R_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000010796-ENSMUSG00000041301 CGP 10090 6:18050964-18322768
GeneTranscriptPositionBiotype
ENSMUSG00000010796 (Asz1)
ankyrin repeat, SAM and basic leucine zipper domain containing 1 		ENSMUST00000010940 (Asz1-001) 18050964-18109057 protein_coding
ENSMUST00000131614 (Asz1-002) 18077063-18109061 processed_transcript
ENSMUST00000136194 (Asz1-004) 18075776-18109045 nonsense_mediated_decay
ENSMUST00000136626 (Asz1-006) 18050983-18109044 retained_intron
ENSMUST00000146216 (Asz1-003) 18073804-18075107 retained_intron
ENSMUSG00000041301 (Cftr)
cystic fibrosis transmembrane conductance regulator 		ENSMUST00000045706 (Cftr-001) 18170687-18322768 protein_coding
ENSMUST00000115405 (Cftr-004) 18170687-18322767 nonsense_mediated_decay
ENSMUST00000115406 (Cftr-006) 18170824-18321033 protein_coding
ENSMUST00000129452 (Cftr-002) 18170771-18236655 protein_coding
ENSMUST00000140407 (Cftr-005) 18170687-18322767 nonsense_mediated_decay
ENSMUST00000140532 (Cftr-003) 18255224-18268130 retained_intron
ENSMUSG00000080767 (Gm15595)
predicted gene 15595 		ENSMUST00000120840 (Gm15595-001) 18294271-18295231 processed_pseudogene
ENSMUSG00000082289 (Gm15596)
predicted gene 15596 		ENSMUST00000121139 (Gm15596-001) 18156337-18157120 processed_pseudogene
ENSMUSG00000084203 (Gm15593)
predicted gene 15593 		ENSMUST00000122085 (Gm15593-001) 18144734-18145741 processed_pseudogene
ENSMUSG00000087389 (Gm15592)
predicted gene 15592 		ENSMUST00000143135 (Gm15592-001) 18270136-18289048 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063R_0001ENSDARG00000004823ENSDART00000005145ENSDARG00000041107ENSDART00000060243ENSDARG00000085222ENSDART00000120622CIL_00063R_0002ENSG00000001626ENST00000003084ENST00000426809ENST00000429014ENST00000446805ENST00000468795ENST00000472848ENST00000546407ENST00000600166ENST00000608965ENST00000610149ENST00000621535ENSG00000077063ENST00000160373ENST00000412853ENST00000416239ENST00000434890ENST00000435233ENST00000441556ENST00000445366ENST00000446636ENST00000454375ENST00000467088ENST00000482124ENST00000487820ENSG00000083622ENST00000456270ENSG00000154438ENST00000284629ENST00000428663ENST00000450714ENST00000463182ENST00000465832ENST00000479454ENSG00000234001ENST00000448200ENSG00000237974ENST00000433478CIL_00063R_0003ENSMUSG00000010796ENSMUST00000010940ENSMUST00000131614ENSMUST00000136194ENSMUST00000136626ENSMUST00000146216ENSMUSG00000041301ENSMUST00000045706ENSMUST00000115405ENSMUST00000115406ENSMUST00000129452ENSMUST00000140407ENSMUST00000140532ENSMUSG00000080767ENSMUST00000120840ENSMUSG00000082289ENSMUST00000121139ENSMUSG00000084203ENSMUST00000122085ENSMUSG00000087389ENSMUST00000143135
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063R_0001ENSDARG00000004823ENSDART00000005145ENSDARG00000041107ENSDART00000060243ENSDARG00000085222ENSDART00000120622CIL_00063R_0002ENSG00000001626ENST00000003084ENST00000426809ENSG00000077063ENST00000160373ENST00000441556ENST00000446636ENSG00000083622ENST00000456270ENSG00000154438ENST00000284629ENST00000450714ENST00000463182ENST00000479454ENSG00000234001ENST00000448200ENSG00000237974ENST00000433478CIL_00063R_0003ENSMUSG00000010796ENSMUST00000010940ENSMUST00000131614ENSMUST00000136194ENSMUST00000136626ENSMUST00000146216ENSMUSG00000041301ENSMUST00000045706ENSMUST00000115405ENSMUST00000115406ENSMUST00000129452ENSMUSG00000080767ENSMUST00000120840ENSMUSG00000082289ENSMUST00000121139ENSMUSG00000084203ENSMUST00000122085ENSMUSG00000087389ENSMUST00000143135
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004823 ENSDART00000005145 N/A N/A N/A 0.145±0.10 N/A N/A 0.048±0.02 9.335±3.30 0.579±0.00 N/A N/A N/A N/A N/A
ENSDARG00000041107 ENSDART00000060243 N/A N/A N/A 0.071±0.01 N/A N/A 0.165±0.17 0.663±0.00 N/A N/A 0.075±0.00 N/A N/A N/A
ENSDARG00000085222 ENSDART00000120622 N/A N/A N/A 8.127±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000001626 ENST00000003084 N/A N/A N/A N/A 0.735±0.00 6.627±4.56 0.031±0.00 N/A N/A 1.562±0.40 N/A 7.786±6.54 0.065±0.00 N/A
ENST00000426809 N/A N/A N/A N/A 0.789±0.00 12.898±0.00 N/A 0.892±0.00 N/A 2.432±0.00 N/A 8.171±0.00 N/A N/A
ENST00000429014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000077063 ENST00000160373 N/A 0.563±0.00 N/A 1.082±0.45 N/A N/A 0.162±0.00 0.497±0.00 0.142±0.00 0.510±0.10 N/A N/A 0.174±0.04 0.169±0.00
ENST00000412853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441556 0.342±0.00 N/A N/A 1.439±0.98 0.328±0.00 N/A 0.233±0.00 0.604±0.00 1.225±0.00 N/A N/A N/A 0.203±0.02 0.524±0.00
ENST00000445366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446636 N/A N/A 0.495±0.00 N/A 0.211±0.00 N/A N/A 1.400±0.00 N/A N/A 0.098±0.00 N/A 0.070±0.00 N/A
ENST00000454375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000083622 ENST00000456270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.816±0.18 N/A 0.072±0.00
ENSG00000154438 ENST00000284629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 2.168±1.00
ENST00000428663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 0.024±0.00 5.898±0.00
ENST00000463182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.679±0.31
ENST00000465832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479454 0.032±0.00 0.067±0.00 N/A 0.018±0.00 0.033±0.00 0.021±0.00 0.017±0.00 0.038±0.00 0.005±0.00 N/A N/A 0.004±0.00 N/A N/A
ENSG00000234001 ENST00000448200 N/A N/A N/A N/A N/A 2.375±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237974 ENST00000433478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.517±0.00 N/A 0.343±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010796 ENSMUST00000010940 N/A N/A 4.180±0.00 N/A N/A N/A N/A N/A 0.018±0.01 0.046±0.01 N/A 0.279±0.08 0.548±0.48 4.022±1.28
ENSMUST00000131614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.431±0.28 0.199±0.14 4.782±0.66
ENSMUST00000136194 N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 0.094±0.00 N/A N/A N/A N/A N/A
ENSMUST00000136626 N/A N/A 0.577±0.00 N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A 0.028±0.02 N/A
ENSMUST00000146216 N/A N/A 20.594±0.00 N/A N/A N/A N/A N/A N/A 0.599±0.00 N/A N/A 0.601±0.33 N/A
ENSMUSG00000041301 ENSMUST00000045706 1.500±0.08 0.049±0.00 N/A 0.046±0.02 N/A 4.433±0.55 0.029±0.01 0.284±0.20 0.019±0.01 1.222±0.26 N/A 1.690±0.85 0.027±0.01 1.922±1.00
ENSMUST00000115405 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.586±0.00
ENSMUST00000115406 0.027±0.02 N/A N/A 0.060±0.02 N/A N/A 0.016±0.00 0.081±0.00 0.030±0.02 0.303±0.02 0.007±0.00 0.734±0.53 0.021±0.01 1.628±0.00
ENSMUST00000129452 N/A 0.103±0.00 N/A N/A 0.065±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080767 ENSMUST00000120840 0.044±0.00 N/A N/A N/A N/A 0.182±0.11 N/A N/A 0.006±0.00 0.044±0.01 N/A 0.137±0.06 N/A 0.115±0.07
ENSMUSG00000082289 ENSMUST00000121139 N/A N/A 0.062±0.03 0.045±0.03 N/A 0.196±0.00 0.147±0.00 0.158±0.00 0.067±0.06 N/A 0.042±0.00 0.677±0.42 0.098±0.07 0.355±0.22
ENSMUSG00000084203 ENSMUST00000122085 0.047±0.02 N/A 0.008±0.00 0.021±0.00 0.125±0.03 0.063±0.00 0.052±0.03 0.044±0.01 0.063±0.00 N/A 0.130±0.00 0.138±0.01 0.005±0.00 0.120±0.08
ENSMUSG00000087389 ENSMUST00000143135 0.022±0.00 N/A N/A N/A 0.032±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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