C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13489
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121234 Gm13489-001 ENSMUSG00000082114 10090 - 2:48809585-48810555 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000121234
Transcript ID Adipose Bladder Brain Breast Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000121234 0.033±0.00 0.040±0.02 0.092±0.01 0.077±0.00 0.035±0.00 0.010±0.00 0.043±0.00 0.072±0.00 0.008±0.00 0.113±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GY CIL_0007GY_0002 CGP 2:44983634-48903269

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 222
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 1e-26 124
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 2e-24 117
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 2e-25 121
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 5e-16 90
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 5e-26 122
ENST00000508195 RP11-616K22.1-001 processed_pseudogene Homo_sapiens 0.00000000000002 84
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 4e-17 94

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