C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 55
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423136 GAPDHP55-001 ENSG00000224055 9606 + 15:44063511-44064313 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastOvaryTestisENST00000423136
Transcript ID Adipose Breast Ovary Testis
ENST00000423136 0.017±0.00 0.081±0.04 0.443±0.00 0.094±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WI CIL_0007WI_0001 VISTA 15:43579049-44181693
CIL_00067Y CIL_00067Y_0001 CGP 15:43826963-44195252
CIL_000687 CIL_000687_0001 CGP 15:43870761-44415758

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 669
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 669
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 669
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 669
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 665
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 658
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 647
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 647
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 643
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 641
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 640
ENSMUST00000182581 Gm4335-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 627
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 627
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000121506 Gm5270-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000182021 Gm4929-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 580
ENSMUST00000120200 Gm11557-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000182266 Gm2467-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 579
ENSMUST00000133495 3000002C10Rik-001 transcribed_processed_pseudogene Mus_musculus 0 573
ENSMUST00000125451 3000002C10Rik-003 processed_transcript Mus_musculus 0 573
ENSMUST00000144161 3000002C10Rik-002 processed_transcript Mus_musculus 0 573
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000182456 Gm16470-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000118792 Gm18859-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000182707 Gm9061-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000182279 Gm4891-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 555
ENSMUST00000082064 Gm6316-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000182705 Gm8343-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000122085 Gm15593-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000180415 Gm5523-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000122068 Gm11960-001 transcribed_processed_pseudogene Mus_musculus 0 529
ENSMUST00000181063 Gm11960-002 processed_transcript Mus_musculus 0 529
ENSMUST00000182201 Gm5300-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000183076 Gm5345-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000181445 Gm7741-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000183259 Gm8565-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000182525 Gm5430-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000118148 Gm13592-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000122032 Gm7150-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000182724 Gm9149-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000182599 Gm6967-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000122207 Gm12864-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000182596 Gm5732-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000190835 RP24-347J6.3-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000182995 Gm5335-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000182716 Gm6771-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000182176 Gm26956-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000181978 Gm8927-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000182945 Gm8955-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 466
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000153034 Gm10364-001 transcribed_processed_pseudogene Mus_musculus 0 457
ENSMUST00000076633 Gm10364-002 processed_transcript Mus_musculus 0 457
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000117926 Gm13527-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000122262 Gm6298-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000182329 Gm7611-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000181525 Gm5706-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000182472 Gm6114-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000182391 Gm26913-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000181990 Gm4823-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000119554 Gm9439-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000144205 Gapdh-005 processed_transcript Mus_musculus 0 427
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000181982 Gm5342-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000182882 Gm9211-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000188558 RP23-337B16.2-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000182434 Gm8245-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000182285 Gm9381-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000182254 Gm9146-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000183205 Gm7627-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000183151 Gm26977-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000122132 Gm14006-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000183159 Gm6317-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000181607 Gm5974-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000180655 Gm5262-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000182096 Gm8601-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000182090 Gm6463-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000190817 RP24-369P14.1-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000182282 Gm17798-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000182302 Gm7132-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000118918 Gm11907-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000182079 Gm15294-002 protein_coding Mus_musculus 0 270
ENSMUST00000181461 Gm2383-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000182505 Gm9274-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000182929 Gm26976-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000182372 Gm27023-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000121234 Gm13489-001 processed_pseudogene Mus_musculus 0 222
ENSMUST00000182052 Gapdh-011 protein_coding Mus_musculus 0 219
ENSMUST00000182115 Gapdh-016 processed_transcript Mus_musculus 0 217
ENSMUST00000182783 Gm27005-001 processed_pseudogene Mus_musculus 3e-32 143
ENSMUST00000182416 Gm3890-001 processed_pseudogene Mus_musculus 1e-30 137
ENSMUST00000182277 Gapdh-010 protein_coding Mus_musculus 1e-30 137
ENSMUST00000118210 Gm11550-001 processed_pseudogene Mus_musculus 5e-30 135

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