C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15542
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121585 Gm15542-001 ENSMUSG00000083396 10090 + 7:140890887-140892080 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121585
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121585 0.109±0.02 0.147±0.07 2.260±2.84 0.115±0.01 0.133±0.00 0.062±0.03 0.115±0.04 0.369±0.32 0.145±0.09 0.169±0.07 0.288±0.11 0.154±0.06 0.231±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QN CIL_0006QN_0002 CGP 7:140863670-140898643
CIL_0005YV CIL_0005YV_0002 CGP 7:140881968-140900446

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330899 DNAJA1-001 protein_coding Homo_sapiens 0 1657
ENST00000399417 DNAJA1P3-001 processed_pseudogene Homo_sapiens 0 1411
ENST00000425106 DNAJA1P1-001 processed_pseudogene Homo_sapiens 0 857
ENST00000440278 DNAJA1P5-001 processed_pseudogene Homo_sapiens 0 719
ENST00000465677 DNAJA1-002 processed_transcript Homo_sapiens 0 401
ENST00000495015 DNAJA1-003 processed_transcript Homo_sapiens 0 353

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