C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005YV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016239-ENSDARG00000097209 CGP 7955 25:10696246-10714186
GeneTranscriptPositionBiotype
ENSDARG00000016239 (psmd13)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 		ENSDART00000104576 (psmd13-001) 10696246-10707922 protein_coding
ENSDART00000104599 (psmd13-002) 10702832-10707820 retained_intron
ENSDARG00000097209 (cox8b)
cytochrome c oxidase subunit 8b 		ENSDART00000155404 (cox8b-001) 10710785-10714186 protein_coding
CIL_0005YV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025487-ENSMUSG00000025488 CGP 10090 7:140881968-140900446
GeneTranscriptPositionBiotype
ENSMUSG00000025486 (Sirt3)
sirtuin 3 		ENSMUST00000026559 (Sirt3-001) 140863670-140882309 protein_coding
ENSMUST00000106048 (Sirt3-002) 140863670-140881869 protein_coding
ENSMUST00000137024 (Sirt3-005) 140865020-140878147 protein_coding
ENSMUST00000137710 (Sirt3-003) 140876434-140881869 protein_coding
ENSMUST00000147331 (Sirt3-004) 140869489-140881869 protein_coding
ENSMUSG00000025487 (Psmd13)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 		ENSMUST00000026560 (Psmd13-001) 140881968-140898642 protein_coding
ENSMUST00000124736 (Psmd13-004) 140882438-140886863 processed_transcript
ENSMUST00000125668 (Psmd13-008) 140890389-140897840 retained_intron
ENSMUST00000129683 (Psmd13-005) 140882452-140889719 processed_transcript
ENSMUST00000130462 (Psmd13-009) 140889400-140898395 protein_coding
ENSMUST00000140411 (Psmd13-003) 140882429-140887265 processed_transcript
ENSMUST00000146875 (Psmd13-006) 140882467-140887178 retained_intron
ENSMUST00000151644 (Psmd13-002) 140882414-140897912 retained_intron
ENSMUST00000153385 (Psmd13-007) 140883500-140886431 processed_transcript
ENSMUST00000163610 (Psmd13-011) 140882472-140898288 protein_coding
ENSMUST00000164681 (Psmd13-013) 140882472-140898233 protein_coding
ENSMUST00000165539 (Psmd13-012) 140894515-140898643 protein_coding
ENSMUST00000166889 (Psmd13-010) 140882472-140898288 nonsense_mediated_decay
ENSMUSG00000025488 (Cox8b)
cytochrome c oxidase subunit VIIIb 		ENSMUST00000026561 (Cox8b-201) 140898943-140900446 protein_coding
ENSMUSG00000083396 (Gm15542)
predicted gene 15542 		ENSMUST00000121585 (Gm15542-001) 140890887-140892080 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YV_0001ENSDARG00000016239ENSDART00000104576ENSDART00000104599ENSDARG00000097209ENSDART00000155404CIL_0005YV_0002ENSMUSG00000025486ENSMUST00000026559ENSMUST00000106048ENSMUST00000137024ENSMUST00000137710ENSMUST00000147331ENSMUSG00000025487ENSMUST00000026560ENSMUST00000124736ENSMUST00000125668ENSMUST00000129683ENSMUST00000130462ENSMUST00000140411ENSMUST00000146875ENSMUST00000151644ENSMUST00000153385ENSMUST00000163610ENSMUST00000164681ENSMUST00000165539ENSMUST00000166889ENSMUSG00000025488ENSMUST00000026561ENSMUSG00000083396ENSMUST00000121585
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YV_0001ENSDARG00000016239ENSDART00000104576ENSDART00000104599ENSDARG00000097209ENSDART00000155404CIL_0005YV_0002ENSMUSG00000025486ENSMUST00000026559ENSMUST00000106048ENSMUST00000147331ENSMUSG00000025487ENSMUST00000026560ENSMUST00000163610ENSMUST00000165539ENSMUST00000166889ENSMUSG00000025488ENSMUST00000026561ENSMUSG00000083396ENSMUST00000121585
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016239 ENSDART00000104576 N/A N/A N/A 18.242±15.38 N/A N/A 16.461±10.79 12.417±12.13 3.261±0.00 N/A 38.370±0.00 N/A N/A N/A
ENSDART00000104599 N/A N/A N/A N/A N/A N/A 11.288±0.00 N/A N/A N/A 15.968±0.00 N/A N/A N/A
ENSDARG00000097209 ENSDART00000155404 N/A N/A N/A 87.436±70.60 N/A N/A 218.309±203.28 21.468±10.50 20.190±0.00 N/A 317.068±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025486 ENSMUST00000026559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.100±2.68
ENSMUST00000106048 N/A 25.254±2.35 19.529±0.00 34.429±0.00 17.495±3.49 N/A 30.122±0.92 47.654±12.35 54.435±14.12 N/A 25.065±0.18 22.730±2.89 N/A 21.428±1.77
ENSMUST00000137024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147331 N/A N/A N/A N/A N/A N/A N/A N/A 38.005±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000025487 ENSMUST00000026560 40.044±3.33 25.898±2.43 31.056±0.56 43.714±0.24 25.822±7.54 40.111±6.40 28.171±3.20 36.238±2.26 41.441±13.23 31.029±2.38 32.724±6.18 32.419±7.68 31.141±15.48 41.703±7.23
ENSMUST00000124736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163610 N/A N/A N/A 49.459±0.00 N/A N/A N/A N/A N/A N/A N/A 52.064±0.00 63.903±14.62 33.823±0.00
ENSMUST00000164681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 232.742±0.00
ENSMUST00000166889 N/A N/A N/A N/A 19.668±0.00 N/A N/A N/A 31.615±0.00 N/A 25.375±1.99 30.502±0.97 35.465±11.38 N/A
ENSMUSG00000025488 ENSMUST00000026561 127.922±68.55 316.715±109.92 2.075±0.28 0.039±0.00 257.620±155.57 1.936±0.98 816.317±186.55 67.783±15.06 0.189±0.14 35.614±12.61 1164.967±58.64 3.287±3.94 0.557±0.06 0.250±0.07
ENSMUSG00000083396 ENSMUST00000121585 0.109±0.02 N/A 0.147±0.07 2.260±2.84 0.115±0.01 0.133±0.00 0.062±0.03 0.115±0.04 0.369±0.32 0.145±0.09 0.169±0.07 0.288±0.11 0.154±0.06 0.231±0.12

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